BinnedNLL#
- class zfit.loss.BinnedNLL(model, data, constraints=None, options=None)[source]#
Bases:
BaseBinned
Binned negative log likelihood.
A scaled Poisson distribution is
used as described by Bohm and Zech, NIMA 748 (2014) 1-6 if the variance of the data is not
None
. The scaling is forced to be >= 1 in order to avoid issues with empty bins.The binned likelihood is the binned version of
UnbinnedNLL
. It is defined as\[\begin{split}\\mathcal{L} = \\product \\mathcal{poiss}(N_{modelbin_i}, N_{databin_i}) = N_{databin_i}^{N_{modelbin_i}} \frac{e^{- N_{databin_i}}}{N_{modelbin_i}!}\end{split}\]where \(databin_i\) is the \(i^{th}\) bin in the data and \(modelbin_i\) is the \(i^{th}\) bin of the model multiplied by the total number of events in data.
A simultaneous fit can be performed by giving one or more
model
,data
, to the loss. Thelength of each has to match the length of the others
\[\mathcal{L}_{simultaneous}(\theta | {data_0, data_1, ..., data_n}) = \prod_{i} \mathcal{L}(\theta_i, data_i)\]where \(\theta_i\) is a set of parameters and a subset of \(\theta\)
For optimization purposes, it is often easier
to minimize a function and to use a log transformation. The actual loss is given by
\[\mathcal{L} = - \sum_{i}^{n} ln(f(\theta|x_i))\]and therefore being called “negative log …”
- Args:
model:Binned PDF(s) that return the normalized probability
(
rel_counts
orcounts
) for data under the given parameters. If multiple model and data are given, they will be used in the same order to do a simultaneous fit.data:Binned dataset that will be given to the model.
If multiple model and data are given, they will be used in the same order to do a simultaneous fit.
constraints:Auxiliary measurements (“constraints”)
that add a likelihood term to the loss.
\[\mathcal{L}(\theta) = \mathcal{L}_{unconstrained} \prod_{i} f_{constr_i}(\theta)\]Usually, an auxiliary measurement – by its very nature -S should only be added once to the loss. zfit does not automatically deduplicate constraints if they are given multiple times, leaving the freedom for arbitrary constructs.
- Constraints can also be used to restrict the loss by adding any kinds of penalties.
options:Additional options (as a dict) for the loss.
Current possibilities include:
‘subtr_const’ (default True): subtract from each points log probability density a constant that is approximately equal to the average log probability density in the very first evaluation before the summation. This brings the initial loss value closer to 0 and increases, especially for large datasets, the numerical stability.
The value will be stored ith ‘subtr_const_value’ and can also be given directly.
The subtraction should not affect the minimum as the absolute value of the NLL is meaningless. However, with this switch on, one cannot directly compare different likelihoods ablolute value as the constant may differ! Use
create_new
in order to have a comparable likelihood between different losses
These settings may extend over time. In order to make sure that a loss is the same under the same data, make sure to use
create_new
instead of instantiating a new loss as the former will automatically overtake any relevant constants and behavior.
- __call__(_x=None)#
Calculate the loss value with the given input for the free parameters.
- Parameters
*positional* – Array-like argument to set the parameters. The order of the values correspond to the position of the parameters in
get_params()
(called without any arguments). For more detailed control, it is always possible to wrapvalue()
and set the desired parameters manually.- Return type
Tensor
- Returns
Calculated loss value as a scalar.
- add_cache_deps(cache_deps, allow_non_cachable=True)#
Add dependencies that render the cache invalid if they change.
- Parameters
cache_deps (ztyping.CacherOrCachersType) –
allow_non_cachable (bool) – If True, allow cache_dependents to be non-cachables. If False, any cache_dependents that is not a ZfitGraphCachable will raise an error.
- Raises
TypeError – if one of the cache_dependents is not a ZfitGraphCachable _and_ allow_non_cachable if False.
- create_new(model=None, data=None, constraints=None, options=None)#
Create a new binned loss of this type. This is preferrable over creating a new instance in most cases.
Internals, such as certain optimizations will be shared and therefore the loss is made comparable.
If something is not given, it will be taken from the current loss.
- Parameters
model (ztyping.BinnedPDFInputType) – Binned PDF(s) that return the normalized probability (
rel_counts
orcounts
) for data under the given parameters. If multiple model and data are given, they will be used in the same order to do a simultaneous fit.data (ztyping.BinnedDataInputType) – Binned dataset that will be given to the model. If multiple model and data are given, they will be used in the same order to do a simultaneous fit.
constraints (ConstraintsInputType) –
Auxiliary measurements (“constraints”) that add a likelihood term to the loss.
\[\mathcal{L}(\theta) = \mathcal{L}_{unconstrained} \prod_{i} f_{constr_i}(\theta)\]Usually, an auxiliary measurement – by its very nature -S should only be added once to the loss. zfit does not automatically deduplicate constraints if they are given multiple times, leaving the freedom for arbitrary constructs.
Constraints can also be used to restrict the loss by adding any kinds of penalties.
options (OptionsInputType) –
Additional options (as a dict) for the loss. Current possibilities include:
’subtr_const’ (default True): subtract from each points log probability density a constant that is approximately equal to the average log probability density in the very first evaluation before the summation. This brings the initial loss value closer to 0 and increases, especially for large datasets, the numerical stability.
The value will be stored ith ‘subtr_const_value’ and can also be given directly.
The subtraction should not affect the minimum as the absolute value of the NLL is meaningless. However, with this switch on, one cannot directly compare different likelihoods ablolute value as the constant may differ! Use
create_new
in order to have a comparable likelihood between different losses
These settings may extend over time. In order to make sure that a loss is the same under the same data, make sure to use
create_new
instead of instantiating a new loss as the former will automatically overtake any relevant constants and behavior.
Returns:
- property dtype: DType#
The dtype of the object.
- get_cache_deps(only_floating=True)#
Return a set of all independent
Parameter
that this object depends on.- Parameters
only_floating (
bool
) – IfTrue
, only return floatingParameter
- Return type
OrderedSet
- get_dependencies(only_floating=True)#
DEPRECATED FUNCTION
Deprecated: THIS FUNCTION IS DEPRECATED. It will be removed in a future version. Instructions for updating: Use get_params instead if you want to retrieve the independent parameters or get_cache_deps in case you need the numerical cache dependents (advanced).
- Return type
OrderedSet
- get_params(floating=True, is_yield=None, extract_independent=True, only_floating=<class 'zfit.util.checks.NotSpecified'>)#
Recursively collect parameters that this object depends on according to the filter criteria.
- Which parameters should be included can be steered using the arguments as a filter.
- None: do not filter on this. E.g.
floating=None
will return parameters that are floating as well as parameters that are fixed.
- None: do not filter on this. E.g.
True: only return parameters that fulfil this criterion
- False: only return parameters that do not fulfil this criterion. E.g.
floating=False
will return only parameters that are not floating.
- False: only return parameters that do not fulfil this criterion. E.g.
- Parameters
floating (
Optional
[bool
]) – if a parameter is floating, e.g. iffloating()
returns Trueis_yield (
Optional
[bool
]) – if a parameter is a yield of the _current_ model. This won’t be applied recursively, but may include yields if they do also represent a parameter parametrizing the shape. So if the yield of the current model depends on other yields (or also non-yields), this will be included. If, however, just submodels depend on a yield (as their yield) and it is not correlated to the output of our model, they won’t be included.extract_independent (
Optional
[bool
]) – If the parameter is an independent parameter, i.e. if it is aZfitIndependentParameter
.
- Return type
set
[ZfitParameter
]
- register_cacher(cacher)#
Register a cacher that caches values produces by this instance; a dependent.
- Parameters
cacher (ztyping.CacherOrCachersType) –
- reset_cache_self()#
Clear the cache of self and all dependent cachers.